All that and the kitchen sink

UPDATED:
Sophisticated Storage
Sophisticated Core

ADDED:
Simple Magnets
Controlling (Search for keybinds)
AppleSkin (See food values)
TpHomes77 (Same functionality as SimpleHomes, just make sure to set your homes again)
JER (Just Enough Resources, an addon for JEI that lets you see the resource spawn and stuff)
DoubleDoors
Sawmill (Stonecutter but for wood)

REMOVED:
Geckos
SimpleHomes (was giving the error message on startup, could not find out why)